Download
Tab seperated file of all sequences in subVOGs.
Columns: VOG id | subvog id | member id | taxonomy id | CDS id | protein description | species | protein sequence | nucleotide sequenceTab seperated file of all conserved structures in subVOGs.
Columns:VOG id | subvog id | start | end | member id | mPID | shannon entropy | gc content | mean MFETab seperated file of all structures in subVOGs.
Columns: VOG id | subvog id | member id | sequence | dot bracket representation | shapiro representation | extended shapiro representation.
Member IDs are not global IDs but identify a protein sequence within a given subVOG. The table lists predicted structures for existing biological protein sequences as well as the (predicted) "consensus structure" of a subVOG.
The latter are no true biological entities but simply the consensus sequence and structure of all protein entries within a subVOG. They can be identified in the member ID column by having the string "consensus" instead of a number in square brackets.List of alignments of the mRNA sequences of all subVOGs in Clustal format.
